talk · Thursday 24 September · 14:00–⁠14:20 · SAL B

Not just another database: building the future of freshwater taxonomy with FADAtims

Astrid Schmidt-Kloiber, Geraldine Mertens · A consensus taxonomic reference for improved freshwater biodiversity data and knowledge

Recording time 5:57:25–6:17:01Open on Vimeo ↗

Summaries and key moments are machine-produced. Check the recording for the speaker’s exact words.

The short versionFADAtims turns the dormant FADA checklists into a living, expert-curated and interoperable freshwater taxonomic infrastructure, but its future depends on sustaining experts and systems.

Overview

What this was about

Astrid Schmidt-Kloiber opened with a caddisfly whose accepted name differs between the Trichoptera World Checklist, GBIF/Catalogue of Life and freshwaterecology.info, arguing freshwater biodiversity has a taxonomy problem rather than a database shortage. Geraldine Mertens recounted how the original Freshwater Animal Diversity Assessment produced species lists and a Hydrobiologia special issue but then stagnated, and how the InfraFADA project rebuilt an expert consortium (over 100 experts, 61 animal groups plus macrophytes) with exchanges from WoRMS and TaxonWorks. Astrid then demonstrated FADAtims, the operational curation system with role-based permissions, bulk upload, detail pages linked to GBIF and the IUCN Red List, and exports including DOI-versioned checklists via ChecklistBank, and raised sustainability of people, infrastructure and interoperability.

Why it matters. Consistent freshwater taxonomy underpins occurrence integration, Red List assessment and ecological analysis; FADAtims is intended as the backbone for several freshwater portals.

Key ideas

In the room

  • Example: Lepidostoma basale is accepted in the Trichoptera World Checklist and freshwaterecology.info but treated as a synonym in GBIF and Catalogue of Life.
  • Freshwater biodiversity has 'not a database shortage, but rather a taxonomy problem'.
  • FADA started over 20 years ago; its expert lists and a Hydrobiologia special issue were produced, but maintenance stopped when funding ended due to technology limits and poor machine-to-machine exchange.
  • InfraFADA rebuilt the expert consortium: over 100 experts, 61 animal groups plus a macrophyte chapter; 43 Excel templates (24 received, 19 in progress), with 15 lists expected from WoRMS and 3 from TaxonWorks.
  • FADAtims supports role-based permissions (expert, expert leader, group member, public), bulk upload, search and filters, and detail pages with taxonomy, environmental information, references and links to GBIF occurrences and the IUCN Red List.
  • Experts curate names, synonyms, classification, authorships, FADA environmental regions and distribution; edits are tracked.
  • Exports include PDFs, CSV and versioned checklists that receive DOIs through ChecklistBank via ColDP packages; DOIs are the main incentive for experts.
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Notable moments

In their words

Transcript

Automatically generated captions can contain mistakes, especially in names and technical terms. Times are relative to the room recording.

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Programme abstract

Not just another database: building the future of freshwater taxonomy with FADAtims

Astrid Schmidt-Kloiber, Geraldine Mertens

Freshwater biodiversity is declining rapidly, yet freshwater taxonomy remains fragmented across databases, standards and expert communities. Maintaining reliable species lists is challenging because names change continuously, new taxa are described, and taxonomic concepts differ between regions and organism groups. These issues limit interoperability between biodiversity infrastructures and constrain large-scale ecological assessments and policy applications. To address this gap, we are developing FADAtims, an online taxonomic information management system for collaborative curation of freshwater biodiversity checklists, which is developed within the Belspo-funded infraFADA project. The platform enables registered experts to curate and continuously update species names, synonyms, classification, distribution and status information through a transparent and traceable workflow. FADAtims is designed as a FAIR, interoperable and machine-actionable infrastructure component for freshwater biodiversity data. Built with open-source technologies and aligned with Biodiversity Information Standards, it supports data exchange with major biodiversity infrastructures including GBIF, Catalogue of Life and the Freshwater Information Platform. Interoperability with systems such as WoRMS and TaxonWorks further supports harmonisation and long-term sustainability. The platform aims to provide an authoritative freshwater taxonomic backbone that can be linked to occurrence, trait and monitoring databases as well as conservation assessments. We present the current status of FADAtims, its role within the emerging freshwater biodiversity data ecosystem and discuss community-driven approaches for sustaining curated freshwater taxonomy infrastructures.

Submitted to the conference programme before the talk, so the talk itself may differ.